Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-3P97334 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Snord17-201ENSMUST00000104526 238 ntBASIC14.44□□□□□ -0.1
Nkx2-3P97334 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm7541-201ENSMUST00000118361 535 ntBASIC14.44□□□□□ -0.1
Nkx2-3P97334 Mir1905-201ENSMUST00000122779 82 ntBASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC14.44□□□□□ -0.1
Nkx2-3P97334 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm19640-201ENSMUST00000214849 464 ntBASIC14.44□□□□□ -0.1
Nkx2-3P97334 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC14.44□□□□□ -0.1
Nkx2-3P97334 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.44□□□□□ -0.1
Nkx2-3P97334 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.44□□□□□ -0.1
Nkx2-3P97334 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.44□□□□□ -0.1
Nkx2-3P97334 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-3P97334 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.43□□□□□ -0.1
Nkx2-3P97334 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Gm9162-201ENSMUST00000182081 991 ntBASIC14.43□□□□□ -0.1
Nkx2-3P97334 Gm31274-201ENSMUST00000197356 229 ntBASIC14.43□□□□□ -0.1
Nkx2-3P97334 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.43□□□□□ -0.1
Nkx2-3P97334 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-3P97334 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-3P97334 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Gm12948-201ENSMUST00000119406 682 ntBASIC14.42□□□□□ -0.1
Nkx2-3P97334 Gm12712-201ENSMUST00000120676 801 ntBASIC14.42□□□□□ -0.1
Nkx2-3P97334 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Gm43377-201ENSMUST00000201640 455 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms