Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 BC043934-202ENSMUST00000185694 2356 ntBASIC10.37□□□□□ -0.75
SgcbP82349 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Paupar-201ENSMUST00000194826 3482 ntBASIC10.37□□□□□ -0.75
SgcbP82349 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.36□□□□□ -0.75
SgcbP82349 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.36□□□□□ -0.75
SgcbP82349 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SgcbP82349 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
SgcbP82349 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.36□□□□□ -0.75
SgcbP82349 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.36□□□□□ -0.75
SgcbP82349 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.36□□□□□ -0.75
SgcbP82349 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.36□□□□□ -0.75
SgcbP82349 Gm38151-201ENSMUST00000195085 289 ntBASIC10.36□□□□□ -0.75
SgcbP82349 Gm9555-201ENSMUST00000200908 583 ntBASIC10.36□□□□□ -0.75
SgcbP82349 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.36□□□□□ -0.75
SgcbP82349 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.36□□□□□ -0.75
SgcbP82349 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.36□□□□□ -0.75
SgcbP82349 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
SgcbP82349 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.36□□□□□ -0.75
SgcbP82349 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SgcbP82349 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.36□□□□□ -0.75
SgcbP82349 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
SgcbP82349 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SgcbP82349 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.35□□□□□ -0.75
SgcbP82349 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.35□□□□□ -0.75
SgcbP82349 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
SgcbP82349 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.35□□□□□ -0.75
SgcbP82349 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.35□□□□□ -0.75
SgcbP82349 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.35□□□□□ -0.75
SgcbP82349 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.35□□□□□ -0.75
SgcbP82349 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.35□□□□□ -0.75
SgcbP82349 Gm11960-201ENSMUST00000122068 925 ntBASIC10.35□□□□□ -0.75
SgcbP82349 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.35□□□□□ -0.75
SgcbP82349 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.35□□□□□ -0.75
SgcbP82349 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.35□□□□□ -0.75
SgcbP82349 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.35□□□□□ -0.75
SgcbP82349 CT025552.1-201ENSMUST00000224561 521 ntBASIC10.35□□□□□ -0.75
SgcbP82349 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms