Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.75□□□□□ -0.37
Hmgb1P63158 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
Hmgb1P63158 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgb1P63158 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm11298-201ENSMUST00000120503 1799 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm25668-201ENSMUST00000157700 129 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm25890-201ENSMUST00000177643 165 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm22614-201ENSMUST00000178300 165 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm18038-201ENSMUST00000197900 485 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm7783-201ENSMUST00000204795 781 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm7940-201ENSMUST00000218195 769 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm270-201ENSMUST00000223010 976 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm26448-201ENSMUST00000082446 203 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm22042-201ENSMUST00000082989 165 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Gm26110-201ENSMUST00000083971 165 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.74□□□□□ -0.37
Hmgb1P63158 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmgb1P63158 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hmgb1P63158 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmgb1P63158 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Hmgb1P63158 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.73□□□□□ -0.37
Hmgb1P63158 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.73□□□□□ -0.37
Hmgb1P63158 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Hmgb1P63158 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Hmgb1P63158 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.73□□□□□ -0.37
Hmgb1P63158 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmgb1P63158 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.73□□□□□ -0.37
Hmgb1P63158 Gm15207-201ENSMUST00000119259 442 ntBASIC12.73□□□□□ -0.37
Hmgb1P63158 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.73□□□□□ -0.37
Hmgb1P63158 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.73□□□□□ -0.37
Hmgb1P63158 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.73□□□□□ -0.37
Hmgb1P63158 Gm37259-201ENSMUST00000193903 849 ntBASIC12.73□□□□□ -0.37
Hmgb1P63158 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Gm5186-201ENSMUST00000218781 920 ntBASIC12.73□□□□□ -0.37
Hmgb1P63158 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Hmgb1P63158 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hmgb1P63158 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms