Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.2□□□□□ -0.78
Sec61a1P61620 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sec61a1P61620 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.2□□□□□ -0.78
Sec61a1P61620 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.2□□□□□ -0.78
Sec61a1P61620 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a1P61620 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.19□□□□□ -0.78
Sec61a1P61620 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Sec61a1P61620 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm27341-201ENSMUST00000183570 106 ntBASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm18827-201ENSMUST00000188341 790 ntBASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm5363-201ENSMUST00000211927 938 ntBASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a1P61620 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a1P61620 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a1P61620 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.18□□□□□ -0.78
Sec61a1P61620 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.18□□□□□ -0.78
Sec61a1P61620 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a1P61620 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a1P61620 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms