Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sf3b6P59708 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm11222-201ENSMUST00000119005 738 ntBASIC10.26□□□□□ -0.77
Sf3b6P59708 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm2546-201ENSMUST00000182630 991 ntBASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm19287-201ENSMUST00000203190 358 ntBASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.26□□□□□ -0.77
Sf3b6P59708 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.26□□□□□ -0.77
Sf3b6P59708 Morn2-202ENSMUST00000227729 656 ntBASIC10.26□□□□□ -0.77
Sf3b6P59708 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.26□□□□□ -0.77
Sf3b6P59708 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.26□□□□□ -0.77
Sf3b6P59708 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.26□□□□□ -0.77
Sf3b6P59708 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sf3b6P59708 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.26□□□□□ -0.77
Sf3b6P59708 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b6P59708 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Rgr-203ENSMUST00000225070 4704 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b6P59708 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b6P59708 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.25□□□□□ -0.77
Sf3b6P59708 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm12463-201ENSMUST00000118271 849 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.25□□□□□ -0.77
Sf3b6P59708 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.25□□□□□ -0.77
Sf3b6P59708 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b6P59708 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.25□□□□□ -0.77
Sf3b6P59708 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms