Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.06□□□□□ -0.64
Ythdf1P59326 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ythdf1P59326 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ythdf1P59326 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ythdf1P59326 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ythdf1P59326 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ythdf1P59326 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.05□□□□□ -0.64
Ythdf1P59326 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.05□□□□□ -0.64
Ythdf1P59326 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.05□□□□□ -0.64
Ythdf1P59326 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.05□□□□□ -0.64
Ythdf1P59326 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Gm20949-201ENSMUST00000206478 952 ntBASIC11.05□□□□□ -0.64
Ythdf1P59326 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Ythdf1P59326 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.05□□□□□ -0.64
Ythdf1P59326 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.05□□□□□ -0.64
Ythdf1P59326 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.05□□□□□ -0.64
Ythdf1P59326 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ythdf1P59326 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Ythdf1P59326 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ythdf1P59326 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.04□□□□□ -0.64
Ythdf1P59326 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.04□□□□□ -0.64
Ythdf1P59326 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.04□□□□□ -0.64
Ythdf1P59326 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.04□□□□□ -0.64
Ythdf1P59326 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ythdf1P59326 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.04□□□□□ -0.64
Ythdf1P59326 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.04□□□□□ -0.64
Ythdf1P59326 Gm43514-201ENSMUST00000198852 424 ntBASIC11.04□□□□□ -0.64
Ythdf1P59326 Gm44855-201ENSMUST00000205725 362 ntBASIC11.04□□□□□ -0.64
Ythdf1P59326 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.04□□□□□ -0.64
Ythdf1P59326 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ythdf1P59326 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ythdf1P59326 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.04□□□□□ -0.64
Ythdf1P59326 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.04□□□□□ -0.64
Ythdf1P59326 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ythdf1P59326 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ythdf1P59326 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ythdf1P59326 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms