Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.56□□□□□ -0.08
Msh6P54276 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC14.56□□□□□ -0.08
Msh6P54276 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Msh6P54276 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Msh6P54276 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Msh6P54276 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Msh6P54276 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Msh6P54276 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Msh6P54276 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Msh6P54276 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Gm42430-201ENSMUST00000197209 616 ntBASIC14.56□□□□□ -0.08
Msh6P54276 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Gm43966-201ENSMUST00000203301 612 ntBASIC14.56□□□□□ -0.08
Msh6P54276 Gm29763-201ENSMUST00000205306 616 ntBASIC14.56□□□□□ -0.08
Msh6P54276 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Gm45856-201ENSMUST00000212752 416 ntBASIC14.56□□□□□ -0.08
Msh6P54276 AC134248.1-201ENSMUST00000216113 1176 ntBASIC14.56□□□□□ -0.08
Msh6P54276 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Msh6P54276 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.56□□□□□ -0.08
Msh6P54276 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Msh6P54276 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Gm28424-201ENSMUST00000187393 1319 ntBASIC14.55□□□□□ -0.08
Msh6P54276 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.55□□□□□ -0.08
Msh6P54276 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.55□□□□□ -0.08
Msh6P54276 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.55□□□□□ -0.08
Msh6P54276 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC14.55□□□□□ -0.08
Msh6P54276 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.55□□□□□ -0.08
Msh6P54276 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Msh6P54276 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.55□□□□□ -0.08
Msh6P54276 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.55□□□□□ -0.08
Msh6P54276 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC14.55□□□□□ -0.08
Msh6P54276 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Mir6941-201ENSMUST00000184711 59 ntBASIC14.55□□□□□ -0.08
Msh6P54276 Gm37852-201ENSMUST00000193027 350 ntBASIC14.55□□□□□ -0.08
Msh6P54276 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Msh6P54276 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.55□□□□□ -0.08
Msh6P54276 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC14.55□□□□□ -0.08
Msh6P54276 Gm7525-201ENSMUST00000219425 454 ntBASIC14.55□□□□□ -0.08
Msh6P54276 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.55□□□□□ -0.08
Msh6P54276 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Msh6P54276 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh6P54276 Gm5171-201ENSMUST00000214944 1415 ntBASIC14.54□□□□□ -0.08
Msh6P54276 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.54□□□□□ -0.08
Msh6P54276 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.54□□□□□ -0.08
Msh6P54276 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC14.54□□□□□ -0.08
Msh6P54276 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.54□□□□□ -0.08
Msh6P54276 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Gm18801-201ENSMUST00000186616 536 ntBASIC14.54□□□□□ -0.08
Msh6P54276 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Msh6P54276 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Msh6P54276 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.54□□□□□ -0.08
Msh6P54276 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Msh6P54276 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Msh6P54276 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Msh6P54276 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Msh6P54276 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 192.8 ms