Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Sox3P53784 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.12□□□□□ -0.63
Sox3P53784 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox3P53784 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Sox3P53784 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Sox3P53784 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox3P53784 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Sox3P53784 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox3P53784 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox3P53784 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Sox3P53784 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.11□□□□□ -0.63
Sox3P53784 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Sox3P53784 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.11□□□□□ -0.63
Sox3P53784 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sox3P53784 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.11□□□□□ -0.63
Sox3P53784 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Gm15036-201ENSMUST00000118880 400 ntBASIC11.11□□□□□ -0.63
Sox3P53784 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.11□□□□□ -0.63
Sox3P53784 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.11□□□□□ -0.63
Sox3P53784 Gm15595-201ENSMUST00000120840 961 ntBASIC11.11□□□□□ -0.63
Sox3P53784 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Sox3P53784 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.11□□□□□ -0.63
Sox3P53784 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Gm6485-201ENSMUST00000160676 439 ntBASIC11.11□□□□□ -0.63
Sox3P53784 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
Sox3P53784 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.11□□□□□ -0.63
Sox3P53784 Gm9645-201ENSMUST00000197131 792 ntBASIC11.11□□□□□ -0.63
Sox3P53784 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Gm18463-201ENSMUST00000207258 474 ntBASIC11.11□□□□□ -0.63
Sox3P53784 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sox3P53784 Gm19009-201ENSMUST00000223072 823 ntBASIC11.11□□□□□ -0.63
Sox3P53784 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.11□□□□□ -0.63
Sox3P53784 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Sox3P53784 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox3P53784 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox3P53784 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Gm11949-201ENSMUST00000117640 372 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Gm13022-201ENSMUST00000121181 285 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Gm5257-201ENSMUST00000121823 790 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.1□□□□□ -0.63
Sox3P53784 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox3P53784 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.1□□□□□ -0.63
Sox3P53784 Gm23045-201ENSMUST00000175041 96 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.1□□□□□ -0.63
Sox3P53784 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Gm10731-201ENSMUST00000181171 448 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Gm8343-201ENSMUST00000182705 994 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms