Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LtbrP50284 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.75□□□□□ -0.21
LtbrP50284 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LtbrP50284 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.75□□□□□ -0.21
LtbrP50284 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LtbrP50284 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LtbrP50284 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LtbrP50284 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LtbrP50284 Gm23272-201ENSMUST00000104053 129 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Gm11619-201ENSMUST00000117474 237 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Gm14892-201ENSMUST00000117636 267 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Gm22846-201ENSMUST00000157706 270 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Gm26368-201ENSMUST00000157826 118 ntBASIC13.74□□□□□ -0.21
LtbrP50284 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.74□□□□□ -0.21
LtbrP50284 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.74□□□□□ -0.21
LtbrP50284 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.74□□□□□ -0.21
LtbrP50284 Gm44315-201ENSMUST00000203041 219 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Gm45525-201ENSMUST00000210800 389 ntBASIC13.74□□□□□ -0.21
LtbrP50284 AC154595.1-201ENSMUST00000225533 1059 ntBASIC13.74□□□□□ -0.21
LtbrP50284 AC165260.4-201ENSMUST00000225924 724 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Gm5451-201ENSMUST00000080545 579 ntBASIC13.74□□□□□ -0.21
LtbrP50284 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LtbrP50284 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.74□□□□□ -0.21
LtbrP50284 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LtbrP50284 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LtbrP50284 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LtbrP50284 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Gm28359-201ENSMUST00000187470 1322 ntBASIC13.73□□□□□ -0.21
LtbrP50284 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LtbrP50284 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LtbrP50284 Gm22594-201ENSMUST00000104251 130 ntBASIC13.73□□□□□ -0.21
LtbrP50284 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LtbrP50284 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LtbrP50284 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.73□□□□□ -0.21
LtbrP50284 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.73□□□□□ -0.21
LtbrP50284 Gm17070-201ENSMUST00000170463 784 ntBASIC13.73□□□□□ -0.21
LtbrP50284 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC13.73□□□□□ -0.21
LtbrP50284 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.73□□□□□ -0.21
LtbrP50284 Gm37981-201ENSMUST00000194280 535 ntBASIC13.73□□□□□ -0.21
LtbrP50284 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.73□□□□□ -0.21
LtbrP50284 Gm43787-201ENSMUST00000197792 1037 ntBASIC13.73□□□□□ -0.21
LtbrP50284 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC13.73□□□□□ -0.21
LtbrP50284 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.73□□□□□ -0.21
LtbrP50284 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.73□□□□□ -0.21
LtbrP50284 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LtbrP50284 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LtbrP50284 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms