Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.67□□□□□ -0.7
Sftpa1P35242 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gm23694-201ENSMUST00000179335 110 ntBASIC10.67□□□□□ -0.7
Sftpa1P35242 Mir7051-201ENSMUST00000184167 73 ntBASIC10.67□□□□□ -0.7
Sftpa1P35242 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gm43969-201ENSMUST00000204833 535 ntBASIC10.67□□□□□ -0.7
Sftpa1P35242 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gm45085-201ENSMUST00000209100 441 ntBASIC10.67□□□□□ -0.7
Sftpa1P35242 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Sftpa1P35242 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Sftpa1P35242 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sftpa1P35242 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm15197-201ENSMUST00000120526 478 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Mir1905-201ENSMUST00000122779 82 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm23400-201ENSMUST00000174994 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm26463-201ENSMUST00000175065 101 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm24332-201ENSMUST00000175102 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm25959-201ENSMUST00000175112 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm22475-201ENSMUST00000175169 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm22903-201ENSMUST00000175193 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm25070-201ENSMUST00000175237 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm24159-201ENSMUST00000175264 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm25299-201ENSMUST00000175283 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm23798-201ENSMUST00000175560 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm23802-201ENSMUST00000175565 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm25708-201ENSMUST00000177687 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm24370-201ENSMUST00000178007 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm23049-201ENSMUST00000178068 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm28019-201ENSMUST00000178138 101 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm25571-201ENSMUST00000178322 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm25355-201ENSMUST00000178456 101 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm24975-201ENSMUST00000178492 101 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm23189-201ENSMUST00000178954 102 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm25100-201ENSMUST00000179750 101 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm23064-201ENSMUST00000179866 101 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm6114-201ENSMUST00000182472 968 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm34379-201ENSMUST00000195036 290 ntBASIC10.66□□□□□ -0.7
Sftpa1P35242 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Sftpa1P35242 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.66□□□□□ -0.7
Sftpa1P35242 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sftpa1P35242 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms