Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vcam1P29533 Gm25201-201ENSMUST00000083093 170 ntBASIC13.23□□□□□ -0.29
Vcam1P29533 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.23□□□□□ -0.29
Vcam1P29533 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vcam1P29533 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vcam1P29533 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vcam1P29533 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vcam1P29533 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.22□□□□□ -0.29
Vcam1P29533 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.22□□□□□ -0.29
Vcam1P29533 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.22□□□□□ -0.29
Vcam1P29533 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vcam1P29533 Gm25343-201ENSMUST00000157460 107 ntBASIC13.22□□□□□ -0.29
Vcam1P29533 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.22□□□□□ -0.29
Vcam1P29533 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.22□□□□□ -0.29
Vcam1P29533 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.22□□□□□ -0.29
Vcam1P29533 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Vcam1P29533 Gm18463-201ENSMUST00000207258 474 ntBASIC13.22□□□□□ -0.29
Vcam1P29533 Gm18460-201ENSMUST00000208088 464 ntBASIC13.22□□□□□ -0.29
Vcam1P29533 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Gm9111-201ENSMUST00000219394 709 ntBASIC13.22□□□□□ -0.29
Vcam1P29533 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.22□□□□□ -0.29
Vcam1P29533 Gm4604-201ENSMUST00000025040 390 ntBASIC13.22□□□□□ -0.29
Vcam1P29533 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.22□□□□□ -0.29
Vcam1P29533 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vcam1P29533 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vcam1P29533 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcam1P29533 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.21□□□□□ -0.29
Vcam1P29533 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.21□□□□□ -0.29
Vcam1P29533 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.21□□□□□ -0.29
Vcam1P29533 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vcam1P29533 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vcam1P29533 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.21□□□□□ -0.29
Vcam1P29533 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vcam1P29533 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.21□□□□□ -0.29
Vcam1P29533 Gm13351-201ENSMUST00000118087 414 ntBASIC13.21□□□□□ -0.29
Vcam1P29533 Gm13549-201ENSMUST00000118339 796 ntBASIC13.21□□□□□ -0.29
Vcam1P29533 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.21□□□□□ -0.29
Vcam1P29533 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.21□□□□□ -0.29
Vcam1P29533 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vcam1P29533 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vcam1P29533 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Vcam1P29533 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcam1P29533 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vcam1P29533 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms