Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RxrbP28704 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
RxrbP28704 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.59□□□□□ -0.55
RxrbP28704 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RxrbP28704 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.59□□□□□ -0.55
RxrbP28704 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RxrbP28704 Gm14644-201ENSMUST00000116671 647 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RxrbP28704 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RxrbP28704 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Gm29396-201ENSMUST00000185659 716 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Gm9230-201ENSMUST00000188228 532 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.59□□□□□ -0.55
RxrbP28704 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.59□□□□□ -0.55
RxrbP28704 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Gm6013-201ENSMUST00000212264 699 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RxrbP28704 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.59□□□□□ -0.55
RxrbP28704 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RxrbP28704 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RxrbP28704 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Gm25007-201ENSMUST00000083808 133 ntBASIC11.59□□□□□ -0.55
RxrbP28704 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.59□□□□□ -0.55
RxrbP28704 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.59□□□□□ -0.55
RxrbP28704 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RxrbP28704 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RxrbP28704 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RxrbP28704 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RxrbP28704 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RxrbP28704 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RxrbP28704 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RxrbP28704 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RxrbP28704 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
RxrbP28704 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RxrbP28704 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.58□□□□□ -0.56
RxrbP28704 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
RxrbP28704 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
RxrbP28704 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RxrbP28704 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RxrbP28704 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RxrbP28704 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RxrbP28704 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RxrbP28704 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RxrbP28704 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RxrbP28704 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RxrbP28704 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RxrbP28704 Gm12015-201ENSMUST00000117065 843 ntBASIC11.58□□□□□ -0.56
RxrbP28704 Gm11500-201ENSMUST00000118237 601 ntBASIC11.58□□□□□ -0.56
RxrbP28704 Mir1896-201ENSMUST00000122641 81 ntBASIC11.58□□□□□ -0.56
RxrbP28704 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.58□□□□□ -0.56
RxrbP28704 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.58□□□□□ -0.56
RxrbP28704 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.58□□□□□ -0.56
RxrbP28704 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.58□□□□□ -0.56
RxrbP28704 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.58□□□□□ -0.56
RxrbP28704 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Gm10312-201ENSMUST00000078515 489 ntBASIC11.58□□□□□ -0.56
RxrbP28704 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.58□□□□□ -0.56
RxrbP28704 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.58□□□□□ -0.56
RxrbP28704 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RxrbP28704 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RxrbP28704 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.57□□□□□ -0.56
RxrbP28704 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RxrbP28704 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RxrbP28704 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RxrbP28704 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RxrbP28704 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RxrbP28704 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.57□□□□□ -0.56
RxrbP28704 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RxrbP28704 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RxrbP28704 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RxrbP28704 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RxrbP28704 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.57□□□□□ -0.56
RxrbP28704 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms