Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nckap1P28660 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nckap1P28660 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.53□□□□□ -0.56
Nckap1P28660 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.53□□□□□ -0.56
Nckap1P28660 Mir1956-201ENSMUST00000157748 65 ntBASIC11.53□□□□□ -0.56
Nckap1P28660 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.53□□□□□ -0.56
Nckap1P28660 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Gm37458-201ENSMUST00000194055 410 ntBASIC11.53□□□□□ -0.56
Nckap1P28660 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.53□□□□□ -0.56
Nckap1P28660 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.53□□□□□ -0.56
Nckap1P28660 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Gm23680-201ENSMUST00000083162 164 ntBASIC11.53□□□□□ -0.56
Nckap1P28660 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nckap1P28660 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nckap1P28660 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nckap1P28660 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nckap1P28660 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Nckap1P28660 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nckap1P28660 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nckap1P28660 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nckap1P28660 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Nckap1P28660 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Nckap1P28660 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Gm16166-201ENSMUST00000118291 787 ntBASIC11.52□□□□□ -0.57
Nckap1P28660 Gm12899-201ENSMUST00000120565 551 ntBASIC11.52□□□□□ -0.57
Nckap1P28660 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nckap1P28660 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Nckap1P28660 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Nckap1P28660 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.52□□□□□ -0.57
Nckap1P28660 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.52□□□□□ -0.57
Nckap1P28660 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.52□□□□□ -0.57
Nckap1P28660 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.52□□□□□ -0.57
Nckap1P28660 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.52□□□□□ -0.57
Nckap1P28660 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.52□□□□□ -0.57
Nckap1P28660 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.52□□□□□ -0.57
Nckap1P28660 Gm19009-201ENSMUST00000223072 823 ntBASIC11.52□□□□□ -0.57
Nckap1P28660 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.52□□□□□ -0.57
Nckap1P28660 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.52□□□□□ -0.57
Nckap1P28660 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nckap1P28660 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.52□□□□□ -0.57
Nckap1P28660 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.52□□□□□ -0.57
Nckap1P28660 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.52□□□□□ -0.57
Nckap1P28660 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nckap1P28660 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nckap1P28660 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nckap1P28660 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nckap1P28660 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.51□□□□□ -0.57
Nckap1P28660 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nckap1P28660 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nckap1P28660 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.51□□□□□ -0.57
Nckap1P28660 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Nckap1P28660 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.51□□□□□ -0.57
Nckap1P28660 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.51□□□□□ -0.57
Nckap1P28660 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.51□□□□□ -0.57
Nckap1P28660 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Mir6958-201ENSMUST00000184207 73 ntBASIC11.51□□□□□ -0.57
Nckap1P28660 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 Gm7504-201ENSMUST00000201449 424 ntBASIC11.51□□□□□ -0.57
Nckap1P28660 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.51□□□□□ -0.57
Nckap1P28660 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.51□□□□□ -0.57
Nckap1P28660 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.51□□□□□ -0.57
Nckap1P28660 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nckap1P28660 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms