Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Gm6082-201ENSMUST00000215204 454 ntBASIC11.32□□□□□ -0.6
BrafP28028 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.32□□□□□ -0.6
BrafP28028 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Gm5455-201ENSMUST00000058710 715 ntBASIC11.32□□□□□ -0.6
BrafP28028 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
BrafP28028 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.32□□□□□ -0.6
BrafP28028 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.32□□□□□ -0.6
BrafP28028 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
BrafP28028 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BrafP28028 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
BrafP28028 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.31□□□□□ -0.6
BrafP28028 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.31□□□□□ -0.6
BrafP28028 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
BrafP28028 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
BrafP28028 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
BrafP28028 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
BrafP28028 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Gm22323-201ENSMUST00000103832 109 ntBASIC11.31□□□□□ -0.6
BrafP28028 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.31□□□□□ -0.6
BrafP28028 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.31□□□□□ -0.6
BrafP28028 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.31□□□□□ -0.6
BrafP28028 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Gm17376-201ENSMUST00000166016 84 ntBASIC11.31□□□□□ -0.6
BrafP28028 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
BrafP28028 Gm27627-201ENSMUST00000183644 150 ntBASIC11.31□□□□□ -0.6
BrafP28028 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.31□□□□□ -0.6
BrafP28028 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.31□□□□□ -0.6
BrafP28028 Gm19287-201ENSMUST00000203190 358 ntBASIC11.31□□□□□ -0.6
BrafP28028 Gm4607-201ENSMUST00000206649 577 ntBASIC11.31□□□□□ -0.6
BrafP28028 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
BrafP28028 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
BrafP28028 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
BrafP28028 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
BrafP28028 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
BrafP28028 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BrafP28028 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
BrafP28028 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.3□□□□□ -0.6
BrafP28028 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.3□□□□□ -0.6
BrafP28028 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
BrafP28028 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.3□□□□□ -0.6
BrafP28028 Gm22133-201ENSMUST00000102082 109 ntBASIC11.3□□□□□ -0.6
BrafP28028 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
BrafP28028 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.3□□□□□ -0.6
BrafP28028 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.3□□□□□ -0.6
BrafP28028 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BrafP28028 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
BrafP28028 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms