Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.98□□□□□ -0.49
H2afxP27661 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.98□□□□□ -0.49
H2afxP27661 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.98□□□□□ -0.49
H2afxP27661 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Gm6736-201ENSMUST00000166583 948 ntBASIC11.98□□□□□ -0.49
H2afxP27661 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afxP27661 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.98□□□□□ -0.49
H2afxP27661 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afxP27661 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afxP27661 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.98□□□□□ -0.49
H2afxP27661 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afxP27661 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.98□□□□□ -0.49
H2afxP27661 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
H2afxP27661 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afxP27661 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
H2afxP27661 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afxP27661 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afxP27661 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC11.97□□□□□ -0.49
H2afxP27661 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.97□□□□□ -0.49
H2afxP27661 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
H2afxP27661 Gm8738-201ENSMUST00000172606 329 ntBASIC11.97□□□□□ -0.49
H2afxP27661 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.97□□□□□ -0.49
H2afxP27661 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.97□□□□□ -0.49
H2afxP27661 Gm38321-201ENSMUST00000195053 235 ntBASIC11.97□□□□□ -0.49
H2afxP27661 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.97□□□□□ -0.49
H2afxP27661 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.97□□□□□ -0.49
H2afxP27661 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
H2afxP27661 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
H2afxP27661 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
H2afxP27661 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
H2afxP27661 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afxP27661 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
H2afxP27661 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.97□□□□□ -0.49
H2afxP27661 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
H2afxP27661 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.96□□□□□ -0.49
H2afxP27661 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.96□□□□□ -0.49
H2afxP27661 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
H2afxP27661 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.96□□□□□ -0.49
H2afxP27661 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
H2afxP27661 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
H2afxP27661 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afxP27661 Gm26927-201ENSMUST00000182385 965 ntBASIC11.96□□□□□ -0.49
H2afxP27661 Gm28882-201ENSMUST00000185504 314 ntBASIC11.96□□□□□ -0.49
H2afxP27661 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.96□□□□□ -0.49
H2afxP27661 Gm37201-201ENSMUST00000191845 523 ntBASIC11.96□□□□□ -0.49
H2afxP27661 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.96□□□□□ -0.49
H2afxP27661 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
H2afxP27661 Gm18584-201ENSMUST00000203098 964 ntBASIC11.96□□□□□ -0.49
H2afxP27661 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms