Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm18734-201ENSMUST00000172937 808 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm27552-201ENSMUST00000183351 62 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm27844-201ENSMUST00000183613 62 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm3332-201ENSMUST00000189337 928 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm18893-201ENSMUST00000198416 943 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm17931-201ENSMUST00000208132 634 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Cd40lgP27548 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.71□□□□□ -0.69
Cd40lgP27548 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cd40lgP27548 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cd40lgP27548 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cd40lgP27548 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cd40lgP27548 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cd40lgP27548 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.71□□□□□ -0.7
Cd40lgP27548 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.71□□□□□ -0.7
Cd40lgP27548 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.7□□□□□ -0.7
Cd40lgP27548 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.7□□□□□ -0.7
Cd40lgP27548 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Cd40lgP27548 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cd40lgP27548 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Cd40lgP27548 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cd40lgP27548 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.7□□□□□ -0.7
Cd40lgP27548 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.7□□□□□ -0.7
Cd40lgP27548 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.7□□□□□ -0.7
Cd40lgP27548 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cd40lgP27548 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Mir3102-201ENSMUST00000175555 104 ntBASIC10.7□□□□□ -0.7
Cd40lgP27548 Gm8100-201ENSMUST00000182906 988 ntBASIC10.7□□□□□ -0.7
Cd40lgP27548 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Gm27390-201ENSMUST00000184516 176 ntBASIC10.7□□□□□ -0.7
Cd40lgP27548 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.7□□□□□ -0.7
Cd40lgP27548 Gm2965-201ENSMUST00000198365 343 ntBASIC10.7□□□□□ -0.7
Cd40lgP27548 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.7□□□□□ -0.7
Cd40lgP27548 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.7□□□□□ -0.7
Cd40lgP27548 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cd40lgP27548 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.7□□□□□ -0.7
Cd40lgP27548 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Cd40lgP27548 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd40lgP27548 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cd40lgP27548 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.69□□□□□ -0.7
Cd40lgP27548 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms