Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Col8a2P25318 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm25148-201ENSMUST00000104611 123 ntBASIC9.62□□□□□ -0.87
Col8a2P25318 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm1848-201ENSMUST00000120711 789 ntBASIC9.62□□□□□ -0.87
Col8a2P25318 Gm11246-201ENSMUST00000120880 345 ntBASIC9.62□□□□□ -0.87
Col8a2P25318 Gm11244-201ENSMUST00000121243 237 ntBASIC9.62□□□□□ -0.87
Col8a2P25318 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 n-R5s84-201ENSMUST00000122591 109 ntBASIC9.62□□□□□ -0.87
Col8a2P25318 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Col8a2P25318 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Col8a2P25318 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.62□□□□□ -0.87
Col8a2P25318 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm44545-201ENSMUST00000208262 746 ntBASIC9.62□□□□□ -0.87
Col8a2P25318 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.62□□□□□ -0.87
Col8a2P25318 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.62□□□□□ -0.87
Col8a2P25318 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Col8a2P25318 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col8a2P25318 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Col8a2P25318 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Col8a2P25318 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Col8a2P25318 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Col8a2P25318 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Col8a2P25318 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Mir1956-201ENSMUST00000157748 65 ntBASIC9.61□□□□□ -0.87
Col8a2P25318 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.61□□□□□ -0.87
Col8a2P25318 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.61□□□□□ -0.87
Col8a2P25318 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC9.61□□□□□ -0.87
Col8a2P25318 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.61□□□□□ -0.87
Col8a2P25318 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Gm6722-201ENSMUST00000221586 390 ntBASIC9.61□□□□□ -0.87
Col8a2P25318 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.61□□□□□ -0.87
Col8a2P25318 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.61□□□□□ -0.87
Col8a2P25318 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Col8a2P25318 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.61□□□□□ -0.87
Col8a2P25318 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col8a2P25318 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms