Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm22323-201ENSMUST00000103832 109 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Mir877-201ENSMUST00000104738 85 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm13996-201ENSMUST00000118456 430 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm28686-201ENSMUST00000187404 609 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm8913-201ENSMUST00000209491 641 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm9797-202ENSMUST00000218003 294 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Tnfrsf1aP25118 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm15207-201ENSMUST00000119259 442 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm44262-201ENSMUST00000204969 372 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm18056-201ENSMUST00000207670 568 ntBASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms