Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Fv4P11370 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Fv4P11370 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.14□□□□□ -0.63
Fv4P11370 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.14□□□□□ -0.63
Fv4P11370 Gm15711-201ENSMUST00000118889 535 ntBASIC11.14□□□□□ -0.63
Fv4P11370 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.14□□□□□ -0.63
Fv4P11370 Gm24749-201ENSMUST00000157838 343 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Gm8815-201ENSMUST00000173809 620 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Gm20495-201ENSMUST00000173902 235 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Fv4P11370 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Fv4P11370 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.14□□□□□ -0.63
Fv4P11370 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Fv4P11370 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.14□□□□□ -0.63
Fv4P11370 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Fv4P11370 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Fv4P11370 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Fv4P11370 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.13□□□□□ -0.63
Fv4P11370 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Fv4P11370 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.13□□□□□ -0.63
Fv4P11370 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Fv4P11370 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Fv4P11370 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Fv4P11370 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.13□□□□□ -0.63
Fv4P11370 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Gm14130-201ENSMUST00000118417 987 ntBASIC11.13□□□□□ -0.63
Fv4P11370 Gm8566-201ENSMUST00000120174 465 ntBASIC11.13□□□□□ -0.63
Fv4P11370 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.13□□□□□ -0.63
Fv4P11370 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Fv4P11370 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.13□□□□□ -0.63
Fv4P11370 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 Gm10807-201ENSMUST00000177134 795 ntBASIC11.13□□□□□ -0.63
Fv4P11370 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Fv4P11370 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Fv4P11370 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.13□□□□□ -0.63
Fv4P11370 Gm6082-201ENSMUST00000215204 454 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms