Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hoxc6P10629 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm6158-201ENSMUST00000109467 904 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.78□□□□□ -0.36
Hoxc6P10629 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc6P10629 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm11996-201ENSMUST00000117538 915 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm25677-201ENSMUST00000174983 72 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hoxc6P10629 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm37852-201ENSMUST00000193027 350 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm9369-201ENSMUST00000196009 733 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm44323-201ENSMUST00000198689 129 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm29763-201ENSMUST00000205306 616 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.78□□□□□ -0.36
Hoxc6P10629 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc6P10629 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc6P10629 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc6P10629 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.78□□□□□ -0.36
Hoxc6P10629 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc6P10629 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.78□□□□□ -0.36
Hoxc6P10629 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc6P10629 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Hoxc6P10629 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc6P10629 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc6P10629 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc6P10629 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc6P10629 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc6P10629 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc6P10629 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Hoxc6P10629 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm25148-201ENSMUST00000104611 123 ntBASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm8111-201ENSMUST00000117659 987 ntBASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm12389-201ENSMUST00000117696 418 ntBASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.77□□□□□ -0.37
Hoxc6P10629 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.77□□□□□ -0.37
Hoxc6P10629 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm34379-201ENSMUST00000195036 290 ntBASIC12.77□□□□□ -0.37
Hoxc6P10629 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.77□□□□□ -0.37
Hoxc6P10629 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxc6P10629 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm8255-201ENSMUST00000218693 305 ntBASIC12.77□□□□□ -0.37
Hoxc6P10629 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hoxc6P10629 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Hoxc6P10629 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxc6P10629 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Hoxc6P10629 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxc6P10629 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hoxc6P10629 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms