Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NclP09405 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NclP09405 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NclP09405 Gm25766-201ENSMUST00000104101 131 ntBASIC17.14■□□□□ 0.33
NclP09405 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC17.14■□□□□ 0.33
NclP09405 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NclP09405 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC17.14■□□□□ 0.33
NclP09405 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC17.14■□□□□ 0.33
NclP09405 Gm44158-201ENSMUST00000203881 505 ntBASIC17.14■□□□□ 0.33
NclP09405 AC166341.2-201ENSMUST00000220571 120 ntBASIC17.14■□□□□ 0.33
NclP09405 CT030170.2-201ENSMUST00000223267 126 ntBASIC17.14■□□□□ 0.33
NclP09405 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NclP09405 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NclP09405 Gm23680-201ENSMUST00000083162 164 ntBASIC17.14■□□□□ 0.33
NclP09405 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
NclP09405 Gm45053-201ENSMUST00000206112 2499 ntBASIC17.14■□□□□ 0.33
NclP09405 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NclP09405 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NclP09405 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NclP09405 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NclP09405 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NclP09405 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
NclP09405 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC17.13■□□□□ 0.33
NclP09405 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC17.13■□□□□ 0.33
NclP09405 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC17.13■□□□□ 0.33
NclP09405 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NclP09405 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC17.13■□□□□ 0.33
NclP09405 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC17.13■□□□□ 0.33
NclP09405 Gm37826-201ENSMUST00000195329 322 ntBASIC17.13■□□□□ 0.33
NclP09405 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC17.13■□□□□ 0.33
NclP09405 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC17.13■□□□□ 0.33
NclP09405 Gm19009-201ENSMUST00000223072 823 ntBASIC17.13■□□□□ 0.33
NclP09405 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC17.13■□□□□ 0.33
NclP09405 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC17.13■□□□□ 0.33
NclP09405 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
NclP09405 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NclP09405 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NclP09405 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Gm43773-201ENSMUST00000198548 2162 ntBASIC17.12■□□□□ 0.33
NclP09405 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC17.12■□□□□ 0.33
NclP09405 Gm13937-201ENSMUST00000121000 988 ntBASIC17.12■□□□□ 0.33
NclP09405 Gm15549-201ENSMUST00000121595 622 ntBASIC17.12■□□□□ 0.33
NclP09405 Gm16397-201ENSMUST00000122201 494 ntBASIC17.12■□□□□ 0.33
NclP09405 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NclP09405 Gm20495-201ENSMUST00000173902 235 ntBASIC17.12■□□□□ 0.33
NclP09405 Gm8531-201ENSMUST00000188319 893 ntBASIC17.12■□□□□ 0.33
NclP09405 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC17.12■□□□□ 0.33
NclP09405 Gm17825-201ENSMUST00000206836 794 ntBASIC17.12■□□□□ 0.33
NclP09405 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC17.12■□□□□ 0.33
NclP09405 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NclP09405 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC17.12■□□□□ 0.33
NclP09405 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NclP09405 Gm43242-201ENSMUST00000199507 1776 ntBASIC17.12■□□□□ 0.33
NclP09405 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NclP09405 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NclP09405 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
NclP09405 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NclP09405 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Gm7841-201ENSMUST00000122108 1629 ntBASIC17.11■□□□□ 0.33
NclP09405 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Gm4294-201ENSMUST00000105169 614 ntBASIC17.11■□□□□ 0.33
NclP09405 Gm14071-201ENSMUST00000117817 509 ntBASIC17.11■□□□□ 0.33
NclP09405 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Gm8492-201ENSMUST00000182375 987 ntBASIC17.11■□□□□ 0.33
NclP09405 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms