Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
ApoeP08226 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
ApoeP08226 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
ApoeP08226 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Gm25214-201ENSMUST00000104573 129 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
ApoeP08226 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.92□□□□□ -0.66
ApoeP08226 Gm11531-201ENSMUST00000117614 555 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.92□□□□□ -0.66
ApoeP08226 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
ApoeP08226 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
ApoeP08226 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Gm5370-201ENSMUST00000187187 574 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.92□□□□□ -0.66
ApoeP08226 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.92□□□□□ -0.66
ApoeP08226 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.92□□□□□ -0.66
ApoeP08226 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.92□□□□□ -0.66
ApoeP08226 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.92□□□□□ -0.66
ApoeP08226 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.92□□□□□ -0.66
ApoeP08226 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.92□□□□□ -0.66
ApoeP08226 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
ApoeP08226 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
ApoeP08226 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.92□□□□□ -0.66
ApoeP08226 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
ApoeP08226 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.91□□□□□ -0.66
ApoeP08226 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
ApoeP08226 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
ApoeP08226 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.91□□□□□ -0.66
ApoeP08226 Gm12015-201ENSMUST00000117065 843 ntBASIC10.91□□□□□ -0.66
ApoeP08226 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.91□□□□□ -0.66
ApoeP08226 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
ApoeP08226 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.91□□□□□ -0.66
ApoeP08226 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.91□□□□□ -0.66
ApoeP08226 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.91□□□□□ -0.66
ApoeP08226 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.91□□□□□ -0.66
ApoeP08226 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.91□□□□□ -0.66
ApoeP08226 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.91□□□□□ -0.66
ApoeP08226 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
ApoeP08226 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.91□□□□□ -0.66
ApoeP08226 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.91□□□□□ -0.66
ApoeP08226 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ApoeP08226 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.91□□□□□ -0.66
ApoeP08226 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.9□□□□□ -0.66
ApoeP08226 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms