Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.02□□□□□ -0.49
P04214 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.02□□□□□ -0.49
P04214 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.02□□□□□ -0.49
P04214 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
P04214 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.02□□□□□ -0.49
P04214 Gm9204-201ENSMUST00000212641 947 ntBASIC12.02□□□□□ -0.49
P04214 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.02□□□□□ -0.49
P04214 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.02□□□□□ -0.49
P04214 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.02□□□□□ -0.49
P04214 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.02□□□□□ -0.49
P04214 Gm7589-201ENSMUST00000085631 534 ntBASIC12.02□□□□□ -0.49
P04214 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Paupar-201ENSMUST00000194826 3482 ntBASIC12.02□□□□□ -0.49
P04214 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.02□□□□□ -0.49
P04214 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P04214 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.02□□□□□ -0.49
P04214 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04214 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P04214 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P04214 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P04214 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
P04214 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
P04214 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Gm11952-201ENSMUST00000121172 821 ntBASIC12.01□□□□□ -0.49
P04214 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.01□□□□□ -0.49
P04214 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
P04214 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04214 Gm23647-201ENSMUST00000175042 109 ntBASIC12.01□□□□□ -0.49
P04214 Rn5s-201ENSMUST00000177555 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.01□□□□□ -0.49
P04214 Gm22109-201ENSMUST00000177995 119 ntBASIC12.01□□□□□ -0.49
P04214 Gm22291-201ENSMUST00000178027 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.01□□□□□ -0.49
P04214 Gm23284-201ENSMUST00000178069 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.01□□□□□ -0.49
P04214 Gm25018-201ENSMUST00000179081 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.01□□□□□ -0.49
P04214 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
P04214 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.01□□□□□ -0.49
P04214 Gm25212-201ENSMUST00000179432 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.01□□□□□ -0.49
P04214 Gm26391-201ENSMUST00000179843 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.01□□□□□ -0.49
P04214 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.01□□□□□ -0.49
P04214 Mir6953-201ENSMUST00000184745 68 ntBASIC12.01□□□□□ -0.49
P04214 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.01□□□□□ -0.49
P04214 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.01□□□□□ -0.49
P04214 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P04214 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
P04214 Gm18010-201ENSMUST00000203553 202 ntBASIC12.01□□□□□ -0.49
P04214 Gm7238-201ENSMUST00000206467 973 ntBASIC12.01□□□□□ -0.49
P04214 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms