Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Hcn1O88704 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hcn1O88704 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Gm26286-201ENSMUST00000104166 134 ntBASIC11.08□□□□□ -0.64
Hcn1O88704 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Hcn1O88704 Gm12266-201ENSMUST00000120311 962 ntBASIC11.08□□□□□ -0.64
Hcn1O88704 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hcn1O88704 Gm27552-201ENSMUST00000183351 62 ntBASIC11.08□□□□□ -0.64
Hcn1O88704 Gm27844-201ENSMUST00000183613 62 ntBASIC11.08□□□□□ -0.64
Hcn1O88704 Gm8956-201ENSMUST00000203939 825 ntBASIC11.08□□□□□ -0.64
Hcn1O88704 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.08□□□□□ -0.64
Hcn1O88704 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hcn1O88704 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Hcn1O88704 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.08□□□□□ -0.64
Hcn1O88704 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.08□□□□□ -0.64
Hcn1O88704 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.08□□□□□ -0.64
Hcn1O88704 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.08□□□□□ -0.64
Hcn1O88704 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Hcn1O88704 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hcn1O88704 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hcn1O88704 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hcn1O88704 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hcn1O88704 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Hcn1O88704 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hcn1O88704 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.07□□□□□ -0.64
Hcn1O88704 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hcn1O88704 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.07□□□□□ -0.64
Hcn1O88704 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hcn1O88704 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.07□□□□□ -0.64
Hcn1O88704 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.07□□□□□ -0.64
Hcn1O88704 Gm26461-201ENSMUST00000175064 290 ntBASIC11.07□□□□□ -0.64
Hcn1O88704 Gm25732-201ENSMUST00000175168 60 ntBASIC11.07□□□□□ -0.64
Hcn1O88704 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Hcn1O88704 Mir7677-201ENSMUST00000184226 67 ntBASIC11.07□□□□□ -0.64
Hcn1O88704 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Gm43184-201ENSMUST00000197247 542 ntBASIC11.07□□□□□ -0.64
Hcn1O88704 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Hcn1O88704 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.07□□□□□ -0.64
Hcn1O88704 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.07□□□□□ -0.64
Hcn1O88704 Gm17931-201ENSMUST00000208132 634 ntBASIC11.07□□□□□ -0.64
Hcn1O88704 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.07□□□□□ -0.64
Hcn1O88704 Gm270-201ENSMUST00000223010 976 ntBASIC11.07□□□□□ -0.64
Hcn1O88704 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.07□□□□□ -0.64
Hcn1O88704 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.07□□□□□ -0.64
Hcn1O88704 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hcn1O88704 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.07□□□□□ -0.64
Hcn1O88704 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hcn1O88704 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.06□□□□□ -0.64
Hcn1O88704 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms