Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm23272-201ENSMUST00000104053 129 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Gm15329-201ENSMUST00000121408 155 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Erich3-203ENSMUST00000189969 3460 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 Gm37458-201ENSMUST00000194055 410 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 Gm43520-201ENSMUST00000197996 164 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.24□□□□□ -0.45
Itgb3O54890 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.24□□□□□ -0.45
Itgb3O54890 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.24□□□□□ -0.45
Itgb3O54890 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Itgb3O54890 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Itgb3O54890 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 Gm5451-201ENSMUST00000080545 579 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 Gm23105-201ENSMUST00000083719 134 ntBASIC12.24□□□□□ -0.45
Itgb3O54890 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Itgb3O54890 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Itgb3O54890 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Itgb3O54890 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Itgb3O54890 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.23□□□□□ -0.45
Itgb3O54890 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Itgb3O54890 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.23□□□□□ -0.45
Itgb3O54890 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Itgb3O54890 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Itgb3O54890 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Itgb3O54890 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.23□□□□□ -0.45
Itgb3O54890 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Itgb3O54890 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.23□□□□□ -0.45
Itgb3O54890 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.23□□□□□ -0.45
Itgb3O54890 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.23□□□□□ -0.45
Itgb3O54890 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Itgb3O54890 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.23□□□□□ -0.45
Itgb3O54890 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Itgb3O54890 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Itgb3O54890 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Itgb3O54890 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.22□□□□□ -0.45
Itgb3O54890 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Itgb3O54890 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Itgb3O54890 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.22□□□□□ -0.45
Itgb3O54890 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.22□□□□□ -0.45
Itgb3O54890 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.22□□□□□ -0.45
Itgb3O54890 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.22□□□□□ -0.45
Itgb3O54890 Gm6722-201ENSMUST00000221586 390 ntBASIC12.22□□□□□ -0.45
Itgb3O54890 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.22□□□□□ -0.45
Itgb3O54890 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.22□□□□□ -0.45
Itgb3O54890 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.22□□□□□ -0.45
Itgb3O54890 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms