Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.29□□□□□ -0.6
Npc1O35604 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.29□□□□□ -0.6
Npc1O35604 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.29□□□□□ -0.6
Npc1O35604 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.29□□□□□ -0.6
Npc1O35604 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.29□□□□□ -0.6
Npc1O35604 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Npc1O35604 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Npc1O35604 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Npc1O35604 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Npc1O35604 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Npc1O35604 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.28□□□□□ -0.6
Npc1O35604 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.28□□□□□ -0.6
Npc1O35604 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Npc1O35604 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Gm12579-201ENSMUST00000118040 783 ntBASIC11.28□□□□□ -0.6
Npc1O35604 Gm8731-201ENSMUST00000118088 412 ntBASIC11.28□□□□□ -0.6
Npc1O35604 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.28□□□□□ -0.6
Npc1O35604 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Mir8093-201ENSMUST00000185043 137 ntBASIC11.28□□□□□ -0.6
Npc1O35604 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.28□□□□□ -0.6
Npc1O35604 Gm3786-201ENSMUST00000202659 378 ntBASIC11.28□□□□□ -0.6
Npc1O35604 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Npc1O35604 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.28□□□□□ -0.6
Npc1O35604 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Npc1O35604 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Npc1O35604 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.28□□□□□ -0.6
Npc1O35604 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npc1O35604 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Npc1O35604 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Npc1O35604 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Npc1O35604 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.27□□□□□ -0.6
Npc1O35604 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Npc1O35604 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Npc1O35604 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Npc1O35604 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Npc1O35604 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Gm22144-201ENSMUST00000157402 102 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Mir1943-201ENSMUST00000158276 73 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Gm23045-201ENSMUST00000175041 96 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Gm38151-201ENSMUST00000195085 289 ntBASIC11.27□□□□□ -0.61
Npc1O35604 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.27□□□□□ -0.61
Npc1O35604 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.27□□□□□ -0.61
Npc1O35604 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.27□□□□□ -0.61
Npc1O35604 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms