Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm13094-201ENSMUST00000117930 409 ntBASIC13.94□□□□□ -0.18
NpcdF8VQB8 Gm13422-201ENSMUST00000118834 504 ntBASIC13.94□□□□□ -0.18
NpcdF8VQB8 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Mir432-201ENSMUST00000157230 75 ntBASIC13.94□□□□□ -0.18
NpcdF8VQB8 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.94□□□□□ -0.18
NpcdF8VQB8 Gm7627-201ENSMUST00000183205 999 ntBASIC13.94□□□□□ -0.18
NpcdF8VQB8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.94□□□□□ -0.18
NpcdF8VQB8 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Gm7939-201ENSMUST00000201233 1050 ntBASIC13.94□□□□□ -0.18
NpcdF8VQB8 BC080696-201ENSMUST00000202858 1218 ntBASIC13.94□□□□□ -0.18
NpcdF8VQB8 Gm44124-201ENSMUST00000204159 472 ntBASIC13.94□□□□□ -0.18
NpcdF8VQB8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Gm18123-201ENSMUST00000210874 822 ntBASIC13.94□□□□□ -0.18
NpcdF8VQB8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.94□□□□□ -0.18
NpcdF8VQB8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
NpcdF8VQB8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NpcdF8VQB8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NpcdF8VQB8 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm15625-201ENSMUST00000117617 1093 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm13039-201ENSMUST00000118638 794 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm14052-201ENSMUST00000121434 1031 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm28937-201ENSMUST00000185413 695 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm29400-201ENSMUST00000187208 695 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm28662-201ENSMUST00000188446 695 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm28251-201ENSMUST00000188835 695 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm37318-201ENSMUST00000194325 695 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm38017-201ENSMUST00000194768 695 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm37287-201ENSMUST00000195449 695 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm37793-201ENSMUST00000195548 695 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm37197-201ENSMUST00000195607 401 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm5468-202ENSMUST00000227851 682 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.93□□□□□ -0.18
NpcdF8VQB8 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.93□□□□□ -0.18
NpcdF8VQB8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NpcdF8VQB8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Gm6158-201ENSMUST00000109467 904 ntBASIC13.92□□□□□ -0.18
NpcdF8VQB8 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Gm2594-201ENSMUST00000214774 742 ntBASIC13.92□□□□□ -0.18
NpcdF8VQB8 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.92□□□□□ -0.18
NpcdF8VQB8 Gm9791-201ENSMUST00000060997 447 ntBASIC13.92□□□□□ -0.18
NpcdF8VQB8 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Mir326-201ENSMUST00000083637 95 ntBASIC13.92□□□□□ -0.18
NpcdF8VQB8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NpcdF8VQB8 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NpcdF8VQB8 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.91□□□□□ -0.18
NpcdF8VQB8 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NpcdF8VQB8 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NpcdF8VQB8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
NpcdF8VQB8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NpcdF8VQB8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NpcdF8VQB8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NpcdF8VQB8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms