Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm17825-201ENSMUST00000206836 794 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm15374-201ENSMUST00000119313 844 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm28937-201ENSMUST00000185413 695 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm29400-201ENSMUST00000187208 695 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm28662-201ENSMUST00000188446 695 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm28251-201ENSMUST00000188835 695 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm37318-201ENSMUST00000194325 695 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm38017-201ENSMUST00000194768 695 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm37287-201ENSMUST00000195449 695 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm37793-201ENSMUST00000195548 695 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.36□□□□□ -0.75
Shank1D3YZU1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Shank1D3YZU1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm16030-201ENSMUST00000159098 603 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms