Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Gm29100-201ENSMUST00000187564 4410 ntBASIC5.9□□□□□ -1.46
Ubr4A2AN08 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Gm8809-201ENSMUST00000119367 743 ntBASIC5.9□□□□□ -1.46
Ubr4A2AN08 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Gm5501-201ENSMUST00000165917 832 ntBASIC5.9□□□□□ -1.46
Ubr4A2AN08 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC5.9□□□□□ -1.46
Ubr4A2AN08 AC107453.3-201ENSMUST00000228205 639 ntBASIC5.9□□□□□ -1.46
Ubr4A2AN08 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Gsta1-201ENSMUST00000098537 875 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ubr4A2AN08 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Gm12716-201ENSMUST00000120606 1354 ntBASIC5.9□□□□□ -1.47
Ubr4A2AN08 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.47
Ubr4A2AN08 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Fthl17-ps1-201ENSMUST00000120058 516 ntBASIC5.9□□□□□ -1.47
Ubr4A2AN08 Gm14231-201ENSMUST00000120090 592 ntBASIC5.9□□□□□ -1.47
Ubr4A2AN08 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Gm26736-201ENSMUST00000180425 1236 ntBASIC5.9□□□□□ -1.47
Ubr4A2AN08 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Gm4772-201ENSMUST00000122221 843 ntBASIC5.9□□□□□ -1.47
Ubr4A2AN08 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.9□□□□□ -1.47
Ubr4A2AN08 0610005C13Rik-211ENSMUST00000211530 402 ntTSL 3 BASIC5.9□□□□□ -1.47
Ubr4A2AN08 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Ubr4A2AN08 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm5944-201ENSMUST00000118182 1001 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm5311-201ENSMUST00000203518 709 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm44156-201ENSMUST00000203885 1189 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm30873-201ENSMUST00000207512 1222 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 AC155300.1-201ENSMUST00000219134 480 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 AC118249.1-201ENSMUST00000224822 608 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 973.3 ms