Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm13916-201ENSMUST00000117368 628 ntBASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm15515-201ENSMUST00000117827 822 ntBASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm13461-201ENSMUST00000120980 662 ntBASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm13263-201ENSMUST00000121271 838 ntBASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm28450-201ENSMUST00000187349 638 ntBASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm5733-201ENSMUST00000190232 939 ntBASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm14028-201ENSMUST00000117434 479 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm8199-201ENSMUST00000121323 823 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm20495-201ENSMUST00000173902 235 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm27341-201ENSMUST00000183570 106 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 AU022133-201ENSMUST00000200601 873 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Gm6108-201ENSMUST00000208365 367 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Mir433-201ENSMUST00000093564 124 ntBASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
H2afb2S4R1M3 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms