Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdh20Q9Z0M3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh20Q9Z0M3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh20Q9Z0M3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh20Q9Z0M3 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gm17040-202ENSMUST00000170597 889 ntBASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh20Q9Z0M3 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm12501-201ENSMUST00000119163 529 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm14277-201ENSMUST00000121195 360 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm23085-201ENSMUST00000157849 293 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm3329-201ENSMUST00000159873 556 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm10807-201ENSMUST00000177134 795 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm2383-201ENSMUST00000181461 807 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm38151-201ENSMUST00000195085 289 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh20Q9Z0M3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms