Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
U2af1Q9D883 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC15.18■□□□□ 0.02
U2af1Q9D883 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
U2af1Q9D883 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
U2af1Q9D883 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
U2af1Q9D883 Gm3551-201ENSMUST00000190750 664 ntBASIC15.18■□□□□ 0.02
U2af1Q9D883 Gm5542-201ENSMUST00000195485 1089 ntBASIC15.18■□□□□ 0.02
U2af1Q9D883 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
U2af1Q9D883 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.18■□□□□ 0.02
U2af1Q9D883 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
U2af1Q9D883 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC15.18■□□□□ 0.02
U2af1Q9D883 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
U2af1Q9D883 Gm23105-201ENSMUST00000083719 134 ntBASIC15.18■□□□□ 0.02
U2af1Q9D883 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
U2af1Q9D883 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
U2af1Q9D883 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
U2af1Q9D883 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
U2af1Q9D883 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
U2af1Q9D883 CT010447.1-201ENSMUST00000225657 1608 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Gm37122-201ENSMUST00000195313 1567 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Gm13888-201ENSMUST00000119148 422 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC15.17■□□□□ 0.02
U2af1Q9D883 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Gm6722-201ENSMUST00000221586 390 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Gm5451-201ENSMUST00000080545 579 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.17■□□□□ 0.02
U2af1Q9D883 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
U2af1Q9D883 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
U2af1Q9D883 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 AC165351.1-201ENSMUST00000219078 2020 ntBASIC15.16■□□□□ 0.02
U2af1Q9D883 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms