Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Gm15610-201ENSMUST00000120584 195 ntBASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Gm45384-201ENSMUST00000210451 277 ntBASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Gm45930-201ENSMUST00000221330 292 ntBASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.63□□□□□ -0.55
Sf3a3Q9D554 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.62□□□□□ -0.55
Sf3a3Q9D554 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm7488-201ENSMUST00000117148 684 ntBASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm11960-201ENSMUST00000122068 925 ntBASIC11.62□□□□□ -0.55
Sf3a3Q9D554 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm6222-202ENSMUST00000182143 629 ntBASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm10268-201ENSMUST00000085340 555 ntBASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.62□□□□□ -0.55
Sf3a3Q9D554 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC11.62□□□□□ -0.55
Sf3a3Q9D554 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm4984-201ENSMUST00000115987 360 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm13875-201ENSMUST00000120162 282 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm7722-201ENSMUST00000120646 741 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm12164-201ENSMUST00000121695 551 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm13570-201ENSMUST00000140763 309 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm6244-201ENSMUST00000178732 841 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm24196-201ENSMUST00000179161 110 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms