Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldnd1Q9CQX5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Gm23255-201ENSMUST00000102244 110 ntBASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cldnd1Q9CQX5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Mir744-201ENSMUST00000103261 100 ntBASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Gm13094-201ENSMUST00000117930 409 ntBASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Mir6953-201ENSMUST00000184745 68 ntBASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Gm43506-201ENSMUST00000200675 753 ntBASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Arhgef33-210ENSMUST00000225548 456 ntBASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldnd1Q9CQX5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms