Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.42□□□□□ -0.74
Krt88Q9CPR6 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Krt88Q9CPR6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Krt88Q9CPR6 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Krt88Q9CPR6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.42□□□□□ -0.74
Krt88Q9CPR6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Krt88Q9CPR6 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Krt88Q9CPR6 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.42□□□□□ -0.74
Krt88Q9CPR6 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Krt88Q9CPR6 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Krt88Q9CPR6 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Gm12742-201ENSMUST00000117326 410 ntBASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Gm12957-201ENSMUST00000117835 377 ntBASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Gm42627-201ENSMUST00000197347 224 ntBASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Gm43966-201ENSMUST00000203301 612 ntBASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Gm18065-201ENSMUST00000221395 526 ntBASIC10.41□□□□□ -0.74
Krt88Q9CPR6 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.41□□□□□ -0.74
Krt88Q9CPR6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Krt88Q9CPR6 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms