Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Gm22146-201ENSMUST00000157397 288 ntBASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Gm26982-201ENSMUST00000182250 1151 ntBASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Gm18463-201ENSMUST00000207258 474 ntBASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Gm18460-201ENSMUST00000208088 464 ntBASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim34aQ99PP6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm24791-201ENSMUST00000104284 131 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm15528-201ENSMUST00000117821 864 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm15374-201ENSMUST00000119313 844 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm21778-201ENSMUST00000178779 471 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm19587-201ENSMUST00000191395 545 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm6423-201ENSMUST00000204315 934 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim34aQ99PP6 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Gm15197-201ENSMUST00000120526 478 ntBASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim34aQ99PP6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 1541 ms