Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Gm5370-201ENSMUST00000187187 574 ntBASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Gm16476-201ENSMUST00000221544 139 ntBASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Tulp2-209ENSMUST00000210813 2153 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2a1Q99PM3 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Fam124b-201ENSMUST00000058748 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Gm15666-202ENSMUST00000219490 2796 ntBASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Bco2-201ENSMUST00000119103 2118 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Gm37052-201ENSMUST00000194929 1831 ntBASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Meis2-203ENSMUST00000102538 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Meis2-201ENSMUST00000028639 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Gm38245-201ENSMUST00000191702 2621 ntBASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2a1Q99PM3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Gm37633-201ENSMUST00000192858 2700 ntBASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms