Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm11960-201ENSMUST00000122068 925 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm17782-201ENSMUST00000174345 880 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm37858-201ENSMUST00000192759 1231 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm37688-201ENSMUST00000195195 465 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm45893-201ENSMUST00000211899 247 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 AC132881.1-201ENSMUST00000223780 1062 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm14524-201ENSMUST00000121066 683 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm25694-201ENSMUST00000175448 282 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm37597-201ENSMUST00000191853 382 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 AC127583.1-201ENSMUST00000224351 540 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm38348-201ENSMUST00000191718 2273 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm7880-201ENSMUST00000203748 871 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Gm22341-201ENSMUST00000083775 129 ntBASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cdh23Q99PF4 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh23Q99PF4 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh23Q99PF4 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh23Q99PF4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh23Q99PF4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdh23Q99PF4 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Gm5764-201ENSMUST00000118817 885 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Gm12961-201ENSMUST00000120507 1050 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Gm24466-201ENSMUST00000179978 109 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Gm40332-201ENSMUST00000199847 938 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms