Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.58■□□□□ 0.08
Rtn4Q99P72 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm14208-201ENSMUST00000119645 678 ntBASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm16296-201ENSMUST00000159905 325 ntBASIC15.57■□□□□ 0.08
Rtn4Q99P72 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm38333-201ENSMUST00000193608 604 ntBASIC15.57■□□□□ 0.08
Rtn4Q99P72 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC15.57■□□□□ 0.08
Rtn4Q99P72 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm10312-201ENSMUST00000078515 489 ntBASIC15.57■□□□□ 0.08
Rtn4Q99P72 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm43636-201ENSMUST00000201501 2235 ntBASIC15.57■□□□□ 0.08
Rtn4Q99P72 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC15.57■□□□□ 0.08
Rtn4Q99P72 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.57■□□□□ 0.08
Rtn4Q99P72 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Ighm-202ENSMUST00000177715 1698 ntAPPRIS P5 BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.57■□□□□ 0.08
Rtn4Q99P72 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4Q99P72 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 1500004A13Rik-205ENSMUST00000184014 2135 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm11439-201ENSMUST00000118598 409 ntBASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm14921-201ENSMUST00000118643 908 ntBASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm13813-201ENSMUST00000120998 787 ntBASIC15.56■□□□□ 0.08
Rtn4Q99P72 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm8018-201ENSMUST00000173536 789 ntBASIC15.56■□□□□ 0.08
Rtn4Q99P72 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm18800-202ENSMUST00000188688 1105 ntBASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4Q99P72 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms