Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.23□□□□□ -0.61
Rnf111Q99ML9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm18893-201ENSMUST00000198416 943 ntBASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm44262-201ENSMUST00000204969 372 ntBASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm4607-201ENSMUST00000206649 577 ntBASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf111Q99ML9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Gm17812-201ENSMUST00000204935 318 ntBASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Rnf111Q99ML9 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.22□□□□□ -0.61
Rnf111Q99ML9 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf111Q99ML9 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.21□□□□□ -0.61
Rnf111Q99ML9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rnf111Q99ML9 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms