Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Gm13445-201ENSMUST00000121664 307 ntBASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx6-1Q99MA9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm12247-201ENSMUST00000117585 670 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm9673-201ENSMUST00000119287 781 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm25830-201ENSMUST00000158923 132 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm37852-201ENSMUST00000193027 350 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm42433-201ENSMUST00000196806 940 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms