Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Usp11Q99K46 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp11Q99K46 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.19□□□□□ -0.46
Usp11Q99K46 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usp11Q99K46 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Usp11Q99K46 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm23949-201ENSMUST00000104027 127 ntBASIC12.19□□□□□ -0.46
Usp11Q99K46 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp11Q99K46 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm14028-201ENSMUST00000117434 479 ntBASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm14277-201ENSMUST00000121195 360 ntBASIC12.19□□□□□ -0.46
Usp11Q99K46 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.19□□□□□ -0.46
Usp11Q99K46 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm27341-201ENSMUST00000183570 106 ntBASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm28071-201ENSMUST00000190355 478 ntBASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm17827-201ENSMUST00000211825 742 ntBASIC12.19□□□□□ -0.46
Usp11Q99K46 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.19□□□□□ -0.46
Usp11Q99K46 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.19□□□□□ -0.46
Usp11Q99K46 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp11Q99K46 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.19□□□□□ -0.46
Usp11Q99K46 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.19□□□□□ -0.46
Usp11Q99K46 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.19□□□□□ -0.46
Usp11Q99K46 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp11Q99K46 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Usp11Q99K46 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp11Q99K46 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Usp11Q99K46 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Usp11Q99K46 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Gm26286-201ENSMUST00000104166 134 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Gm12380-201ENSMUST00000119012 544 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp11Q99K46 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.18□□□□□ -0.46
Usp11Q99K46 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Usp11Q99K46 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Gm8956-201ENSMUST00000203939 825 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Gm17931-201ENSMUST00000208132 634 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Gm5363-201ENSMUST00000211927 938 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Usp11Q99K46 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.18□□□□□ -0.46
Usp11Q99K46 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Usp11Q99K46 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms