Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.42□□□□□ -0.26
Smc1bQ920F6 Gm21092-201ENSMUST00000178995 955 ntBASIC13.42□□□□□ -0.26
Smc1bQ920F6 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.42□□□□□ -0.26
Smc1bQ920F6 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.42□□□□□ -0.26
Smc1bQ920F6 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.42□□□□□ -0.26
Smc1bQ920F6 Gm9139-201ENSMUST00000218817 700 ntBASIC13.42□□□□□ -0.26
Smc1bQ920F6 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smc1bQ920F6 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.42□□□□□ -0.26
Smc1bQ920F6 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.42□□□□□ -0.26
Smc1bQ920F6 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.42□□□□□ -0.26
Smc1bQ920F6 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Gm22920-201ENSMUST00000102175 109 ntBASIC13.41□□□□□ -0.26
Smc1bQ920F6 Gm14193-201ENSMUST00000105067 153 ntBASIC13.41□□□□□ -0.26
Smc1bQ920F6 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Gm14760-201ENSMUST00000121831 999 ntBASIC13.41□□□□□ -0.26
Smc1bQ920F6 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Rprl1-201ENSMUST00000158050 327 ntBASIC13.41□□□□□ -0.26
Smc1bQ920F6 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.41□□□□□ -0.26
Smc1bQ920F6 Gm4654-201ENSMUST00000183305 982 ntBASIC13.41□□□□□ -0.26
Smc1bQ920F6 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.41□□□□□ -0.26
Smc1bQ920F6 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.41□□□□□ -0.26
Smc1bQ920F6 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.41□□□□□ -0.26
Smc1bQ920F6 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smc1bQ920F6 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Gm43778-201ENSMUST00000199438 199 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms