Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm15276-201ENSMUST00000145953 498 ntBASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm38266-201ENSMUST00000194931 421 ntBASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm6439-201ENSMUST00000199849 862 ntBASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm6334-201ENSMUST00000207083 228 ntBASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm13097-201ENSMUST00000210722 397 ntBASIC11.94□□□□□ -0.5
Trim60Q8VI40 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm7940-201ENSMUST00000218195 769 ntBASIC11.94□□□□□ -0.5
Trim60Q8VI40 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.94□□□□□ -0.5
Trim60Q8VI40 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.93□□□□□ -0.5
Trim60Q8VI40 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gm12463-201ENSMUST00000118271 849 ntBASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.93□□□□□ -0.5
Trim60Q8VI40 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.93□□□□□ -0.5
Trim60Q8VI40 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.93□□□□□ -0.5
Trim60Q8VI40 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.93□□□□□ -0.5
Trim60Q8VI40 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Erich3-203ENSMUST00000189969 3460 ntBASIC11.93□□□□□ -0.5
Trim60Q8VI40 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms