Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Gm13996-201ENSMUST00000118456 430 ntBASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Gm38241-201ENSMUST00000192641 898 ntBASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Mir433-201ENSMUST00000093564 124 ntBASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Rnf8Q8VC56 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Gm29199-201ENSMUST00000187766 775 ntBASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Gm45224-201ENSMUST00000208203 414 ntBASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf8Q8VC56 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.18□□□□□ -0.62
Rnf8Q8VC56 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.18□□□□□ -0.62
Rnf8Q8VC56 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Rnf8Q8VC56 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf8Q8VC56 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf8Q8VC56 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.18□□□□□ -0.62
Rnf8Q8VC56 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf8Q8VC56 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf8Q8VC56 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf8Q8VC56 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf8Q8VC56 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms