Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Gm12091-201ENSMUST00000146791 830 ntBASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Gm2495-201ENSMUST00000191160 466 ntBASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Gm7357-201ENSMUST00000195361 2991 ntBASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc9Q8VC31 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Gm38314-201ENSMUST00000195709 625 ntBASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Gm6180-201ENSMUST00000065243 498 ntBASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 AC115746.1-201ENSMUST00000228949 3617 ntBASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Ccdc9Q8VC31 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Gm12928-201ENSMUST00000117115 573 ntBASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc9Q8VC31 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc9Q8VC31 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.86□□□□□ -0.19
Ccdc9Q8VC31 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc9Q8VC31 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc9Q8VC31 Gm38357-201ENSMUST00000195382 2464 ntBASIC13.86□□□□□ -0.19
Ccdc9Q8VC31 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc9Q8VC31 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc9Q8VC31 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms