Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm17376-201ENSMUST00000166016 84 ntBASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Gm8815-201ENSMUST00000173809 620 ntBASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.66□□□□□ -0.22
Cchcr1Q8K2I2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Gm5714-201ENSMUST00000197343 566 ntBASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Gm45113-201ENSMUST00000207518 165 ntBASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Gm6082-201ENSMUST00000215204 454 ntBASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cchcr1Q8K2I2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Gm15711-201ENSMUST00000118889 535 ntBASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Gm13350-201ENSMUST00000120519 479 ntBASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Gm24749-201ENSMUST00000157838 343 ntBASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms