Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.85□□□□□ -0.51
CopaQ8CIE6 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Gm14724-201ENSMUST00000118400 537 ntBASIC11.84□□□□□ -0.51
CopaQ8CIE6 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Gm23085-201ENSMUST00000157849 293 ntBASIC11.84□□□□□ -0.51
CopaQ8CIE6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.84□□□□□ -0.51
CopaQ8CIE6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopaQ8CIE6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.83□□□□□ -0.51
CopaQ8CIE6 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CopaQ8CIE6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
CopaQ8CIE6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CopaQ8CIE6 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gm8566-201ENSMUST00000120174 465 ntBASIC11.83□□□□□ -0.52
CopaQ8CIE6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gm8100-201ENSMUST00000182906 988 ntBASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gm3508-201ENSMUST00000186012 792 ntBASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gm37835-201ENSMUST00000193305 361 ntBASIC11.83□□□□□ -0.52
CopaQ8CIE6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Rgr-203ENSMUST00000225070 4704 ntBASIC11.83□□□□□ -0.52
CopaQ8CIE6 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.83□□□□□ -0.52
CopaQ8CIE6 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms