Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc87Q8CDL9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc87Q8CDL9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.27□□□□□ -0.44
Ccdc87Q8CDL9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccdc87Q8CDL9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc87Q8CDL9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc87Q8CDL9 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc87Q8CDL9 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Gm13296-201ENSMUST00000117854 997 ntBASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Gm16570-201ENSMUST00000161951 436 ntBASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Gm19287-201ENSMUST00000203190 358 ntBASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Erich3-203ENSMUST00000189969 3460 ntBASIC12.27□□□□□ -0.45
Ccdc87Q8CDL9 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Gm14017-201ENSMUST00000121934 386 ntBASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Btrc-209ENSMUST00000224478 2194 ntBASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc87Q8CDL9 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms