Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Gm23251-201ENSMUST00000103773 110 ntBASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Gm24844-201ENSMUST00000158679 127 ntBASIC12.72□□□□□ -0.37
Trim9Q8C7M3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Gm12407-201ENSMUST00000180219 324 ntBASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.72□□□□□ -0.37
Trim9Q8C7M3 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.72□□□□□ -0.37
Trim9Q8C7M3 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim9Q8C7M3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.71□□□□□ -0.37
Trim9Q8C7M3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm22711-201ENSMUST00000116890 133 ntBASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm37246-201ENSMUST00000192665 835 ntBASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm5363-201ENSMUST00000211927 938 ntBASIC12.71□□□□□ -0.37
Trim9Q8C7M3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim9Q8C7M3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim9Q8C7M3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm4909-201ENSMUST00000118749 794 ntBASIC12.7□□□□□ -0.38
Trim9Q8C7M3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms